BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002A03LP1|AL424881
(865 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig859 1554 0.0
>3x_Contig859
Length = 2084
Score = 1554 bits (770), Expect = 0.0
Identities = 833/863 (96%), Gaps = 4/863 (0%)
Strand = Plus / Plus
Query: 3 catctcaccctgccggctcttcgtcaaccggaaccacgacgcctcagcaaaacaaacgta 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 catctcaccctgccggctcttcgtcaaccggaaccacgacgcctcagcaaaacaaacgta 789
Query: 63 aaccaaagaagtctgctactactgctgggaacagcaatgggaacgaaaatgccctttacc 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 790 aaccaaagaagtctgctactactgctgggaacagcaatgggaacgaaaatgcccat-acc 848
Query: 123 gctggtaccccaagtgacggcaatagtgttaacttaaccggcaaggactctacaccagac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 gctggtaccccaagtgacggcaatagtgttaacttaaccggcaaggactctacaccagac 908
Query: 183 aatagctccgaaacaaagcgtggcaaggcccatcaccatcaacaaccatcatcaagatct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 aatagctccgaaacaaagcgtggcaaggcccatcaccatcaacaaccatcatcaagatct 968
Query: 243 ggtacgcctgtygtcggatcgaaaaaacagcagaggaaaggtaaagacataccgttggca 302
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 ggtacgcctgtcgtcggatcgaaaaaacagcagaggaaaggtaaagacataccgttggca 1028
Query: 303 ccaaaagccgatatccgtcttcctgacaaagaatacgacagtktggacgaagaagagtgt 362
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1029 ccaaaagccgatatccgtcttcctgacaaagaatacgacagtatggacgaagaagagtgt 1088
Query: 363 wagadaacgatgacaaacgtccgtagctcactcaaacgtctaagatctggaggagacggt 422
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 aagaaaacgatgacaaacgtccgtagctcactcaaacgtctaagatctggaggagacggt 1148
Query: 423 cttgaacgtaagckatgggctaacctattgaagaaggaattgadacgtgttggtgactac 482
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1149 cttgaacgtaagcaatgggctaacctattgaagaaggaattgaaacgtgttggtgactac 1208
Query: 483 atcgaatcgcacaagaaggactcgtctaagacctctccagaaaaatataadagacattta 542
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1209 atcgaatcgcacaagaaggactcgtctaagacctctccagaaaaatataaaagacattta 1268
Query: 543 tggtctttcactgcatattactggccaagagatgtcccatcttccaaactcctggccgnt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 1269 tggtctttcactgcatattactggccaagagatgtcccatcttccaaactcctgg-cgat 1327
Query: 603 gtaccgacaaaatcaaacgcctctgaacattaattastcaaatgtaacaaaacatasasa 662
||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||| | |
Sbjct: 1328 gta-cgacaaaatcaaa-gcctctgaacattaattagtcaaatgtaacaaaacatagaga 1385
Query: 663 tatatacgcctatcaatttacsaaaaaaaaaaacatatctaatcaacaacatattsctat 722
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||
Sbjct: 1386 tatatacgcctatcaatttacgaaaaaaaaaaagatatctaatcaacaacatattgctat 1445
Query: 723 tasttattattaccttcataaatsacatsasgcacaassgcgcaccagaaamasccsgct 782
|| |||||||||||||||||||| |||| | |||||| |||||||||||| | || |||
Sbjct: 1446 tagttattattaccttcataaatgacatgaggcacaagggcgcaccagaaacagccggct 1505
Query: 783 sctagtaaaatacctggtttgttgtggtgatgcctcagatcatttcgcacgtacctacct 842
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1506 gctagtaaaatacctggtttgttgtggtgatgcctcagatcatttcgcacgtacctacct 1565
Query: 843 ttccttttgtggaaamgctttaa 865
||||||||||||||| |||||||
Sbjct: 1566 ttccttttgtggaaaagctttaa 1588
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9278
Number of Sequences: 1807
Number of extensions: 9278
Number of successful extensions: 101
Number of sequences better than 1.0e-20: 1
length of query: 865
length of database: 10,358,551
effective HSP length: 16
effective length of query: 849
effective length of database: 10,329,639
effective search space: 8769863511
effective search space used: 8769863511
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.4 bits)